CDS
Accession Number | TCMCG057C47072 |
gbkey | CDS |
Protein Id | XP_018456547.1 |
Location | join(631634..631948,632030..632176,632248..632475,632559..632651,632735..632800,632943..633032,633121..633198,633565..633668,634148..634268,634357..634449,634693..634741,634811..634914,634988..635056,635237..635377,635467..635571,635642..635755,635865..635943,636220..636263,636359..636535,636621..636755,636827..636925,637004..637045,637135..637188,637272..637451,637546..637593,637710..637757,638008..638091,638166..638240,638353..638537,638625..638727,639017..639133,639252..639344,639562..639720,639816..639869,640031..640144,640286..640363,640490..640639,640782..640853,641252..641449,641555..641708,641793..641869,641951..642079,642195..642308,642462..644006) |
Gene | LOC108827602 |
GeneID | 108827602 |
Organism | Raphanus sativus |
Protein
Length | 2107aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA344915 |
db_source | XM_018601045.1 |
Definition | PREDICTED: nuclear-pore anchor [Raphanus sativus] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGCCCTTGTTTATGCCCGACGACGAGCTCGCGCGGCTCTCTAGCAGCGACGCCGCCTCGGTGGTGGTCGCCGAGAGAGCCGACGAGTACATCCGCAAGCTCTACGCCGAGCTTGACAGCGTCCGCGCCAAGGCTGATGCTGCTTCCATCACCGCGGAGCAGACGTGCTCGCTTCTCGAGCAGAAGTACCTCTCGCTCTCTCACGATTTCGCGTCGCTCGAATCTCAGAACGCGAAGCTTCAGTCTGATCTCGATGGTAGATTGGCTGAGCTCGCGCAGTCTCAGGCGGAGAAGCACCAGCTTCATTTGCAATCGATTGAGAAGGATGGAGAGTTAGAGAGGATGACTACGGAGATGTCTGAGCTACACAAGTCCAAGAGGCAGCTGATGGAGTTGCTAGAGCAGAAAGATTCCGAGATTAGCGAGAAGAATTCGAATATCAAAAGCTATTTGGATAAAATTGTTAAGTTGACTGACGCTAGTTCGGAGAAGGAGTCCAGATATGCTGAAGCAGGCGCAGAGTTGGCGCGTTCACAAGCTATGTGCAGTCGTTTATCTCAGGAGAAAGAGCTCATGGAGAGGCATACTAAATGGCTTGATGAGGAGTTAACAGCCAAAGTTGATAGTTATGCTGAACTCCGTAGGAGGCATTCTGATCTCGAGGCTGAAATGTCAGCGAAGCTTGTGGATGTTGAGAAAAATTACAATGAGTGCTCTAGTTCGTTAAATTGGCATAAGGAAAGACTGAGAGAGCTGGAAGCTAAGGTTACTTCATTACAAGAGGAGCTCAGCTCGTGCAGAGTTGCAGCAGCGGCCACTGAAGAGCAATACAATGCTGAACTTTCTACTGCGAACAAGCTTGTTGAGCTGTACAAGGAAAGTTCGGAGGAATGGTCCAGAAAGGCGGGCGAACTTGAAGGTGTCGTTAAGGCCTTAGAGGCACGCTTGAACCAAGTCGAGAGTGGGTACAAAGATAGTCTTGAGAAAGAAATGTCTACAAACCAGCAGCTAGAGAAGGAGAACCAAGACCTTAAACAAAAACATGAGAAGCTTGAAGCAGAGATTGAGAAAACTAGGAAAACAAATGAGCTAACGCTTTTACCTTTCAGCAGTTTCACAAGAGGGGCAGACGATTCAGGGACCAGCAACATGATAGAGGAAAGCCATGCAATAATTTCCAAGGTTCCTGCTGGTGTGTCAGGAACGGCACTGGCAGCTTCACTCTTACGTGATGGGTGGAGTTTGGCCAAAATTTATGAGAAGTATCAAGAGGCTGTTGATGCAATGAGACATGAGCAATTAGGTCGAAAGGAAGCTGAGTTGATACTACAACGGGTTTTATCCGAATTAGAAGAGAAAGCTGAATTTATCCAAGATGAAAGAGGTGAGCATGAGCGTTTGGTTGAAGCTTATTCACTAGTCAATCAAAAACTTCAGGATTCTGTATCTGAGCAATCAAATATGGAGAAGTACATCATGGAGCTAAAGGCTGACTTGAGGAGACGGGAACGTGAAAATATTCTATCTCAGAAAGATATATCTGACTTACAGAAGCAGGTAACGATACTACTGAAGGAGTGCCGTGATGTCCAACTCCGCTGTGGAGCTGCCAGGGATGATGAAGAAGATGATACTCAGCTTTCTGATGTTGAGATGGATATGGAATCTGAAGCTGATAAAATTATTTCAGAGCATCTTTTGAAGTTTAAAGATATAAATGGACTAGTTGAGCAGAATGTTAAGCTCCGAAACCTTGTTCGTAGTCTCTCAGAGCAGATTGAAAGTAGGGAAATGGAGCTCAAGGAAATGTTTGAGACAGAACTAAAGAAAAAGACTGATGAAGCTTCTTCCAAAGTAGCCATCGTGCTCAAAAGAGCTGAAGAGCAGGGTCAAATGATTGAAGCACTTCACACATCTGTTGCAATGTATAAACGACTATATGAAGAGGAACAAAAACGTTATTCATCTAATTCTCGTTCTTCAGATTTGCCTCCAGTGCCAGGAAGGAATAACTTTTTACACCTGCTTGAGGATTCACAGGAAGCTACGAAAAGAGCCCAAGAAAAAACTTTTGAACGCATCCGAAATCTGGAAGAAGATTTAGCGAAGGCTAGGAGTGAGATAATAGCGATAAGGTCTGAACGGGATAAGTTGGCCATGGAGGCAAATTTTGTTAGGGAAAAACTAGAAGGCATCATGAAAGAATCTGAACGCAAGAGAGAAGAAATGAACGGTGTTTTGGCAAGAAACATAGAGTTCTCGCAGCTGATCATCGACCACCAAAGGAAGTTACGTGAGAGTTCTGAGTCTCTGCATGCAGCGGAAGAGATTTCTCGAAAATTATCAATGGAGGTTTCGGTTCTAAAACAAGAAAAAGAGGTGTTATCCAGTGCTGAAAAACGAGCTTCTGATGAAGTTTCTGCTCTATCTCAGAGAGTTTATCGTCTTCAGGCTACCTTGGATACTATACAGAGTACAGAGGAAGTTCGTGAGGAAGCAAGAGCTGCCGAGAGAAGGAAACAAGAGGAGCATATCAAGCAACTTGAGAAAGAATGGGCTGAAGCTAAAAAAGAATTGCAAGAAGAAAGGAGCAATTCGCGAAATAGCACTTCGGACCGCAATCAAACTTTGAACAATGCTGTTATGCAGGTCGAAGAAATGGGAAAAGAATTGGCTAATGCCTTGAAGGCTGTCACGGCAGCAGAGTCAAGGGCTTCTGTGGCTGAGGCTAGACTTTCTGATTTGGAGAAGAAGATAAGGTCTTCAGATCCTAAGGGCCTTGATATGGACAGTGGTGGGGTCGTCTCTCTTTCTGATAATGAGATGTCCGTAGAACTGCGTACTGCAAAGGAAGAAATGGAAAAGCTGAGGGGAGATGTAGAATCTAGCAAAAGCCACATGCTTCAGTACAAGAGTATAGCACAGGTGAACGAAACTGCGTTGAGGCAAATGGAATCTGCCCATGAGAACTTCAGACTTGAGGCTGAAAAGAGACAGGAAACATTGGAAGCAGAGCTTGTTTCTCTTAGGGAAAGGGTGTCAGAACTTGAAAACGACTGTCTACAAAAATCTGAGCAGATAGCCAATGCTGCTGCAGGAAAAGAAGATGCTCTTGTATCAGCATCAGCTGAAATTGCAAGCCTGAGAGAAGAAAGCTTAGTTAAAAGTTCCCAAATCGAAGCAATGAATATCCAAATGTCCACTTTGAAGGATGACTTGGAGAAGGAACATGAGAAATGGCGTGTTGCTCAGACAAATTATGAAAGACAGGTTATTCTACAGTCTGAAACTATTCAAGAGCTGACGAAAACTTCGCAGGCTTTGGCTTCCCTTCAAGAGGAGGCATCTGAACTACGTAAATTGGCTGATTCGAGGGGAACGGAAATTTCCGAGCTTAACTCCAAGTGGAGTGAAGAGAAATGTATGCTAGAGCAGCAAAAGAATCAAGCGGAGAAGATGTATCATGAACTTAATGAACAGAACAAATTACTCCATAGCCGACTTGAGGCTATGCATCTTCGCTCGGCTGAGAAAGATAGCCGTTCTGGAAACCTATCATCTGGAAGCACTGACTCGGATCAACTTGGAGATTCTGGTTTACAAAGTGTAGTTAATTATTTGCGCAAAACAAAGGAAATAGCTGAAACAGAAATATCACTTATGAGACAGGAAAAATTACGGTTGCAATCGCAACTTGAGAGTGCCTTGAAGATGGCGGAATCTGCCCGGGGTTCACTTAATGCTGAGCGTGCCAGTACAAGGGCCTCATTATTGAGTGAAGATGAAATCAAATCTCTTCAGCTCCAGGTTAGTGAGGTGAACTTGCTCCGTGAAAGCAACATGCAACTCAGAGAAGAAAACAAACACAATTTTGAGGAGTGCCAGAGATTGCGTGAGGTAGCTCAAAAGGCTAAGACGGATTCCGAAAACTTTGAAAATCTATTGAAGCAAAAGCAAACCGAGTTAGACTTGTGTATAAGAGAGATGGAAAGGCTAAGGAAGGACTCAGATCTTGAAAAGAAGAGGGTTGATGAGTTGAGGGAGACGTATAAAAACATTGATGTTGCTGACTACAATCGCCTCAAAGATGAAGTGCGGCAACTCGAGGATAAGCTGAAAGCGAAAGATGACCATATTGAAGTTTTCAAGAAGCTTCTGTTAGAGAAGCAGAATAAGATAGCGCTACTAGAGAAGGATCTAGCAAACTGTAAAAACGAACTGAGCGAGAGGGAGAAGGATCTAACAAAATGCAAAGCAGAAGTGAGTGAGAGGGAGAAGAAATTAGACGCTGCTCAGCAAGCAGAGGCGACTATGCAGTCAGAGACTGAGAAGCTGAAAGCAGATATCACAAGGATTAGGAAATCTTACACCTTCATGAAGAAAAAGCTCGAAAAAGAAAGGGACGATTTGAACAGTGATAATCAGTCACTCTCTAAACAGTTAGGGGAAGCCAAAGAGGCTGGAAAGAGAACAGCAACTGATGCTACGGTGGAGCAGGCCGTCAAGGAGAGAGATGAAAAGGAACAAAAAATTCAGATATTGGATAAGTATCTTCATTCACTGAAAGATGACCTGAAGAAGAAGGATGACGAATTAACAAAAGAGAAAACAGAACGCAAGTCTGTTGAGAAGATACTTGGAGACTCCTTGGCCAAAATTAAAGAGGAGAAAACAAAAGTGGATGAAGAGCTTGTTAAGCTCGAGAGGTATCAGACGGCATTGGCTAATCTCTCTGAAGAATTGGACAAATTGAAGCAAGCAGATGGAAATCTTCCAGAGGGTACTTCGGCTGTCCAGGTTCTCTCTGGAAGCGTATTGAATGACCAAGCCGCTGCCTACGTATCAGCTGTTGAGTCTTTTGAACGCATGGCTCGTACTTTTGTCCTCAATTCTCAAGGCAACACCAGTTCTACCGATATGGTTACTGAAGCTTCCCCTGCTATAGTTGAGTCTTCAGCCATTGCCAGAGCTTCTTCGTCAAAAGCACCGGTGGCAACTACCCAGCAGCCACCCAAAGTGAAGAGATTGACTTTGCAGAAACCAAACACTGAACTCCGCAGAGGGAGGATTATTCGTCCCCAGCTTGGCAAACTAGAGGAACCTCCGCAAGTTGATGCTGAGATGCCAGAAGCTGAAGTAGCTGGTGGTGAAGGAAAACAGCCTTCCTCCAATGTCACAGAGAGTCAAGGAACCACCGTTGTACCGCCTGTTCAGACACAAGTCCGTAAACGCCAAGCTGATTCGTTGACTTCTGAGCCACCGCAAGCGACTCAAGGGGAAGCTAGTACCGAGATTGTACCACCTGCGTCTAAGAAGTCGAAAGGATCTGAGAATGAACCTGATACTGCCGAAGGTGAAAACCTCTCCAAAGAGCCAGACGTGGATGAAACCATGGATGCTACCCTTGCCGCCGAAGATGATAATGAAGAAACAGAAGCTGAGACTGCAGATGAGGAAACTGTGGAAGCACAACAAGAAAATGAACCTGAAGAAGGGCAGGATAAAATTGATGACGAACCGGTAGAAGAAAATCCAACCCAGACCGAAGAAGAGTTGAAGGATCAGACCGAACAAGAGAATCAAGATCTTCCGACAGACGCGGAGTTTGATAAAGAAGAAGGAGAGCTCGATCTAGATACACTGGAAGATCTCGAAGAGACTACTGATGTAGCGACTACACCCATGCAGTCACCTATTAGGATGGAGACAACTATGGAGGAAGCTGAAACAACCATTGAGCCACCACTAGATGATGTTAAGGACGATGAAGGAGGTGATGTAGCTGCTGAAGAAGCCTCTGATAAGCCCAACGATGGTAAGAATCAACAAGTAGCAGAAGCCGATCTCAAGCCCGAGAGCACAGTAGTTACAACTGCATCTGCATCTGCATCTGCCACTCCACCCACTTCCTCTACTCCAGCATCTGCAAGTCCGGTCGAAACTCCAGAAACTGAAGAAACGAAAAGAAACCGATCTCAAGTAGCAGAGACCAAAGTAGCTACAACTGTCTCTGCATCTACCACTCCAGCATCTGCAGGTGCGAGCGAAACTCCAGAAACTGAAGAAACGAAAAGAGCAGCGTCGCCAAGTAGGACTATTAATATAGCTGATAAAGCAAAGGAGAAAGCAGCTATAAGACAAGCCGGAGTAGCTGCTACTCTAGGAGGGACCCGAACTCCTTCACCAGCCAACCGTGCTCCTTCACCACCCGCTCCTAGAGGTCGTGGTCGAATTGTGAACACTCGAGGAGGCAATCGAGTGCTACTTACTCGTGGTGGCCGAACCCAACGTGGTGGACGTGGACCACCGCCGAGCCAGCCGTGA |
Protein: MPLFMPDDELARLSSSDAASVVVAERADEYIRKLYAELDSVRAKADAASITAEQTCSLLEQKYLSLSHDFASLESQNAKLQSDLDGRLAELAQSQAEKHQLHLQSIEKDGELERMTTEMSELHKSKRQLMELLEQKDSEISEKNSNIKSYLDKIVKLTDASSEKESRYAEAGAELARSQAMCSRLSQEKELMERHTKWLDEELTAKVDSYAELRRRHSDLEAEMSAKLVDVEKNYNECSSSLNWHKERLRELEAKVTSLQEELSSCRVAAAATEEQYNAELSTANKLVELYKESSEEWSRKAGELEGVVKALEARLNQVESGYKDSLEKEMSTNQQLEKENQDLKQKHEKLEAEIEKTRKTNELTLLPFSSFTRGADDSGTSNMIEESHAIISKVPAGVSGTALAASLLRDGWSLAKIYEKYQEAVDAMRHEQLGRKEAELILQRVLSELEEKAEFIQDERGEHERLVEAYSLVNQKLQDSVSEQSNMEKYIMELKADLRRRERENILSQKDISDLQKQVTILLKECRDVQLRCGAARDDEEDDTQLSDVEMDMESEADKIISEHLLKFKDINGLVEQNVKLRNLVRSLSEQIESREMELKEMFETELKKKTDEASSKVAIVLKRAEEQGQMIEALHTSVAMYKRLYEEEQKRYSSNSRSSDLPPVPGRNNFLHLLEDSQEATKRAQEKTFERIRNLEEDLAKARSEIIAIRSERDKLAMEANFVREKLEGIMKESERKREEMNGVLARNIEFSQLIIDHQRKLRESSESLHAAEEISRKLSMEVSVLKQEKEVLSSAEKRASDEVSALSQRVYRLQATLDTIQSTEEVREEARAAERRKQEEHIKQLEKEWAEAKKELQEERSNSRNSTSDRNQTLNNAVMQVEEMGKELANALKAVTAAESRASVAEARLSDLEKKIRSSDPKGLDMDSGGVVSLSDNEMSVELRTAKEEMEKLRGDVESSKSHMLQYKSIAQVNETALRQMESAHENFRLEAEKRQETLEAELVSLRERVSELENDCLQKSEQIANAAAGKEDALVSASAEIASLREESLVKSSQIEAMNIQMSTLKDDLEKEHEKWRVAQTNYERQVILQSETIQELTKTSQALASLQEEASELRKLADSRGTEISELNSKWSEEKCMLEQQKNQAEKMYHELNEQNKLLHSRLEAMHLRSAEKDSRSGNLSSGSTDSDQLGDSGLQSVVNYLRKTKEIAETEISLMRQEKLRLQSQLESALKMAESARGSLNAERASTRASLLSEDEIKSLQLQVSEVNLLRESNMQLREENKHNFEECQRLREVAQKAKTDSENFENLLKQKQTELDLCIREMERLRKDSDLEKKRVDELRETYKNIDVADYNRLKDEVRQLEDKLKAKDDHIEVFKKLLLEKQNKIALLEKDLANCKNELSEREKDLTKCKAEVSEREKKLDAAQQAEATMQSETEKLKADITRIRKSYTFMKKKLEKERDDLNSDNQSLSKQLGEAKEAGKRTATDATVEQAVKERDEKEQKIQILDKYLHSLKDDLKKKDDELTKEKTERKSVEKILGDSLAKIKEEKTKVDEELVKLERYQTALANLSEELDKLKQADGNLPEGTSAVQVLSGSVLNDQAAAYVSAVESFERMARTFVLNSQGNTSSTDMVTEASPAIVESSAIARASSSKAPVATTQQPPKVKRLTLQKPNTELRRGRIIRPQLGKLEEPPQVDAEMPEAEVAGGEGKQPSSNVTESQGTTVVPPVQTQVRKRQADSLTSEPPQATQGEASTEIVPPASKKSKGSENEPDTAEGENLSKEPDVDETMDATLAAEDDNEETEAETADEETVEAQQENEPEEGQDKIDDEPVEENPTQTEEELKDQTEQENQDLPTDAEFDKEEGELDLDTLEDLEETTDVATTPMQSPIRMETTMEEAETTIEPPLDDVKDDEGGDVAAEEASDKPNDGKNQQVAEADLKPESTVVTTASASASATPPTSSTPASASPVETPETEETKRNRSQVAETKVATTVSASTTPASAGASETPETEETKRAASPSRTINIADKAKEKAAIRQAGVAATLGGTRTPSPANRAPSPPAPRGRGRIVNTRGGNRVLLTRGGRTQRGGRGPPPSQP |